PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO78975 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | B3 | ||||||||
Protein Properties | Length: 215aa MW: 24288.2 Da PI: 10.2154 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.9 | 6.9e-17 | 127 | 211 | 1 | 91 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k ++ps+v+ +l lp +f++++ +k ++ +tl de+g+++ + +rk++ l++GWk+F+ a++L +gD vvF+l+++++f+ OMO78975 127 FIKSMLPSHVSGGFWLGLPVHFCKTNL-PK-RDEVMTLIDEEGEEYPTIYLVRKTG----LSGGWKGFAVAHELADGDAVVFQLVRSTTFK 211 89*********************9884.33.5568***************777777....************************9877663 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVVAKPKLSY EESRQKRIEE NKKRMEALNL PQLSQALRTS PFKPSPKKQS KPRIVEKQLV 60 VVRRSSRVAN LPSPVYKEVV VERVAIPRRT SKPRDLNLVY ASEEDRAEAL EKAEKLESSL 120 GTDFPIFIKS MLPSHVSGGF WLGLPVHFCK TNLPKRDEVM TLIDEEGEEY PTIYLVRKTG 180 LSGGWKGFAV AHELADGDAV VFQLVRSTTF KVIAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 2e-65 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO78975 |