PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OMO78293 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 147aa MW: 17122.2 Da PI: 9.5137 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.1 | 8.4e-10 | 90 | 124 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+ +gL+++q+ +WF N+R ++ OMO78293 90 KWPYPTEADKIALAETTGLDQKQINNWFINQRKRH 124 569*****************************985 PP | |||||||
2 | ELK | 28.3 | 4.1e-10 | 44 | 65 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++Llr +++++++Lk EFs OMO78293 44 DLKDRLLRRFGSHISTLKLEFS 65 69*******************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 147 aa Download sequence |
MGQLIMKRLE GSNRPNEGGA SSEEDLSGGE IDGQDAQPRS EDRDLKDRLL RRFGSHISTL 60 KLEFSKKKKK GKLPREARQT LLDWWNVHYK WPYPTEADKI ALAETTGLDQ KQINNWFINQ 120 RKRHWKPSES MQFAVMDNLS GQFFTEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G23380.2 | 5e-52 | TALE family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OMO78293 |