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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO77632 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | HSF | ||||||||
Protein Properties | Length: 361aa MW: 41248.2 Da PI: 5.5487 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 113.6 | 1.3e-35 | 43 | 135 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d++++ ++sws+ g sfvv+d+++f++++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++i+ OMO77632 43 FLTKTFDMVDDPNTNYIVSWSRGGGSFVVWDPHSFSTNLLPRYFKHNNFSSFVRQLNTYGFRKIDPDK---------WEFANEGFLRGQKHLLKNIR 130 9****************************************************************999.........******************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ OMO77632 131 RRKTT 135 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MNPYFPVKEE YPSSSYSVSE EDSTTMPPPQ PMEGLHDTGP PPFLTKTFDM VDDPNTNYIV 60 SWSRGGGSFV VWDPHSFSTN LLPRYFKHNN FSSFVRQLNT YGFRKIDPDK WEFANEGFLR 120 GQKHLLKNIR RRKTTSQPPG SSQQALGPCV EVGRFGVDGE VERLRRDKQV LMMELVKLRQ 180 QQQNTRAYLQ AMEERLQGTE KKQQQMMSFL ARAMQNPSFV QQLMQQKEKR KEIEEAMSKK 240 RRRPIDQGRA GHVVSIGESS RGSGSGGIMN HVKPEPLDFT SDYGYQVTEL EALALEMQGY 300 GRTRKGQEDS QDDKELDAGF WEELLNERFE GELDIPGTEV GEDEDVNVLA DRLGYLGSSP 360 K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 229 | 243 | KRKEIEEAMSKKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 1e-131 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO77632 |