PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO76898 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | TALE | ||||||||
Protein Properties | Length: 643aa MW: 71892.1 Da PI: 9.2752 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28 | 3.8e-09 | 276 | 312 | 19 | 55 |
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++++ LA+++gL+++q+ +WF N+R ++ OMO76898 276 HYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 312 45679*****************************885 PP | |||||||
2 | ELK | 40.2 | 7.3e-14 | 232 | 253 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ OMO76898 232 ELKGQLLRKYSGYLGSLKQEFM 253 9********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 643 aa Download sequence |
MEGGSNSTCC MMGFGHNSNG LCPMTMMPLM TSHQHHHHHH PHHPNSDSNP LFLPLPPTNN 60 QDHHNHNSSS GSSMILDDNN NNNNGCYVMD TNDGSSSSVK AKIMAHPHYH RLLAAYVNCQ 120 KVGAPPEVVA RLEACASAAT MGSSGTGCLG EDPALDQFME AYCEMLTKYE QELSKPFKEA 180 MLFLQRVECQ FKALTVSSPI SACGEAVERN GSSEEEADVN NNFIDPLAED RELKGQLLRK 240 YSGYLGSLKQ EFMKKRKKGK LPKEARQQLL EWWSRHYKWP YPSESQKLAL AESTGLDQKQ 300 INNWFINQRK RHWKPSEDMQ FVFVDFWNMA LSVSRRIVRS FGSLSALGRC DSSTVVSRSS 360 QASDSISRLS VDYLPHAECF GLPKGGLSSL ACRRFSSTIL TPDSAENAFP SDLLSSKTVL 420 TPDRTIGLYQ DLVIPVTNFH NEDKGLMVLA GDVFDVPIRK DIIHRVVLWQ LAKRQQGTHS 480 TKTISEVSGT GRKPWAQKKT GRARHGTLRG PQFRGGAIMH GPKPRSHAFK LNKKVRRLGL 540 KIVLSARAAE GKLIVFEDLE VPTHKTKNIV NYVKQMEDSK KLLMVDGGPI NEKLKLATQN 600 LHYVNVLPSI GLNVYSILQH DTLVMSRDAV NMIVERMHTP INR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 248 | 257 | LKQEFMKKRK |
2 | 254 | 258 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62360.1 | 1e-122 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO76898 |