PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO76483

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 294aa MW: 31992.4 Da PI: 9.2359

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO76483	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	115.7	2e-36	47	104	2	59
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++++lkcprCdstntkfCyynny+ sqPr+fCkaC+r+WtkGG+lrnvPvGggr++++ OMO76483 47 NSEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCKACKRHWTKGGTLRNVPVGGGRKNKR 104 57899***********************************************976665 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MGLSSKQVSS DGLGSWNQSL LQAQTLELPK SNSSMKRPNN PQNQQQNSEQ LKCPRCDSTN 60 TKFCYYNNYN KSQPRHFCKA CKRHWTKGGT LRNVPVGGGR KNKRLKTSSN TNTAAVVAAA 120 AAVATTGHAS SSAIKSSTTT SFMAIQPPQQ RQVNPTMQFP SSLLQQNSSV NCKSNNNSMF 180 LGSSISSQSL PQTQGMQFPF SSSSSSSFDT TTPSSISTSF QSSSIYNYTG SETMEDPTIS 240 SIIMPSTTVS QPWPIPITSS GMDMANNYWN WDDIDALVSS TDLNIPWDDS EIKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	2e-30	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO76483