PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO76420 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | HSF | ||||||||
Protein Properties | Length: 206aa MW: 23545.6 Da PI: 8.2115 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 101.6 | 7.2e-32 | 24 | 130 | 2 | 103 |
HHHHHHHHHCTG..............GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEES CS HSF_DNA-bind 2 Flkklyeilede..............elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhk 84 Fl+k+y +le++ + k+++sw+++g+ fvv+ + ef++ Lp++Fkh+nf+SF+RQLn+YgFkk++++ weFkh+ OMO76420 24 FLSKTYALLEESaeeeaaaaetgdyyDRKKIVSWNAEGTGFVVWSPAEFSELTLPRFFKHNNFSSFIRQLNTYGFKKTSSKI---------WEFKHE 111 9*********777888899999999999*************************************************98765.........****** PP XXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 85 sFkkgkkellekikrkkse 103 +Fk+g k++l +i rkk+e OMO76420 112 KFKRGCKHMLVEITRKKTE 130 ****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MNKTCATSSS CSSLSPRTKG PSPFLSKTYA LLEESAEEEA AAAETGDYYD RKKIVSWNAE 60 GTGFVVWSPA EFSELTLPRF FKHNNFSSFI RQLNTYGFKK TSSKIWEFKH EKFKRGCKHM 120 LVEITRKKTE PSAFPAFLKA SDNDQLNIIG EENSKQTLME ENENLRKEKV ELQAQIAQFK 180 ALEIKLLDCL AQHMDNSSNH NERKLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 2e-34 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO76420 |