PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO76394 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | SBP | ||||||||
Protein Properties | Length: 143aa MW: 16287 Da PI: 8.3819 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 137.3 | 4.4e-43 | 57 | 133 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqve+C+adl++ak+yhrrhkvCe+h+k+p+v v+g++qrfCqqCsrfhel efDe+krsCrrrLa+hnerrrk+++ OMO76394 57 CQVENCNADLTDAKKYHRRHKVCEFHAKSPMVRVAGIHQRFCQQCSRFHELAEFDETKRSCRRRLAGHNERRRKSSS 133 **************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MATSKADGKR SLKEMTEDEE EEDEDITPLG FSDDIEKKKR GKRGSSAAGG SSALPSCQVE 60 NCNADLTDAK KYHRRHKVCE FHAKSPMVRV AGIHQRFCQQ CSRFHELAEF DETKRSCRRR 120 LAGHNERRRK SSSDYQGDTS NYN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 3e-45 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO76394 |