PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO76392
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family Dof
Protein Properties Length: 302aa    MW: 32741.3 Da    PI: 9.8421
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO76392genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.85e-382482462
    zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                +kcprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+ss
  OMO76392 24 PPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRSS 82
              5689**************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MKQQDRRLKP AAAENQQPQP PQHPPQKCPR CESLNTKFCY YNNYSLSQPR YFCKTCRRYW  60
TQGGTLRNVP VGGGCRKGKR SSTKASSSSQ PPLIPQQQQQ NLTTTVTQSM ISSNPMISSK  120
SGTLASSSSG ISSMGSYNYP GGGFLSSLAA IQTMNQPQSF NQPLNQAMTL GSEFGATSNL  180
GLLQGFGGVP SFGSQQQPIQ QTPFFHMGNR EKTVNMYPSP DEEGLINQST RPHLAATTSH  240
QQNWHQSFIK SDNPTITESG LWSMNNNGSS GAGNTNTSNT TAAASLNPNH QWPDLPGYGA  300
PP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.11e-31Dof family protein