PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO76202 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | Dof | ||||||||
Protein Properties | Length: 172aa MW: 19021.7 Da PI: 9.5452 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.2 | 4.3e-39 | 45 | 103 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k OMO76202 45 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKP 103 68999***************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MVMASQEGQG IKLFGTTITL HGRQQVKEEQ INKGDVNNPS LDKRPDKIIP CPRCKSMETK 60 FCYFNNYNVN QPRHFCKGCQ RYWTAGGALR NVPVGAGRRK AKPPGRGLGG FPDGCLYDGS 120 SDHEVVQSQF ELEGMVLAAD EWHVAAAAAN GGFRQVFPMK RRRISCSGGQ PY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 164 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29160.1 | 3e-58 | Dof family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO76202 |