PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO76122

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 569aa MW: 59255.5 Da PI: 7.8146

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO76122	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	57	4.1e-18	130	175	4	49
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnv 49 + ++cprC+stn fCy+ y+l qP y+CkaCrr W + Gal OMO76122 130 RPSECPRCQSTNIEFCYFYKYNLGQPHYLCKACRRSWMESGALGPR 175 5689**************************************9655 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MDEGASSGAS EINDPGSTYV DRKSPEKEKI SWIDFAKFDY AVAAQAGLSQ IREKYSNLRR 60 SIPSPIREGS MANGAGGVTG TGTAGGKALI VPELSLCHSH MTSGNDPDTG SMSDGDRMAN 120 ILMQEAALKR PSECPRCQST NIEFCYFYKY NLGQPHYLCK ACRRSWMESG ALGPRPCQST 180 SLNSVTSKII DDSRKLTELR LSPNVPEGGV GWESYGYHYG DPGASSSTSP AASRGHHDNY 240 NNMTASSHQD NHRLPDNHRL PDHALTSIGS GLGGHGGGGA QSNSPRTRAS TSSGGGGAQS 300 NSPGTRASAS SGLGDHDGGG TQSNYSSRTR PSTSSGLGDH GGGGAQSNTP GTRPSTSSGQ 360 ADHGGGSGAQ STNSLMARAS TSSGLGGNIN GGGTQANSPS TMASGASPPH HVVCIPDDET 420 KKLLNDVVEG RAIRDDDGSI ARYGLLLGAL YTLTSSMSWD TVFSTYSNGS LPLSIKIFGY 480 GTGFFAAVGV FFGPLVLYIG AKKPDTLPLK LNPANVMQTL LDVATANIAF AFIGNMSLRF 540 LQHDVTLLYL VAGLACASIT VSMTFVKRR

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MDEGASSGAS EINDPGSTYV DRKSPEKEKI SWIDFAKFDY AVAAQAGLSQ IREKYSNLRR  60
SIPSPIREGS MANGAGGVTG TGTAGGKALI VPELSLCHSH MTSGNDPDTG SMSDGDRMAN  120
ILMQEAALKR PSECPRCQST NIEFCYFYKY NLGQPHYLCK ACRRSWMESG ALGPRPCQST  180
SLNSVTSKII DDSRKLTELR LSPNVPEGGV GWESYGYHYG DPGASSSTSP AASRGHHDNY  240
NNMTASSHQD NHRLPDNHRL PDHALTSIGS GLGGHGGGGA QSNSPRTRAS TSSGGGGAQS  300
NSPGTRASAS SGLGDHDGGG TQSNYSSRTR PSTSSGLGDH GGGGAQSNTP GTRPSTSSGQ  360
ADHGGGSGAQ STNSLMARAS TSSGLGGNIN GGGTQANSPS TMASGASPPH HVVCIPDDET  420
KKLLNDVVEG RAIRDDDGSI ARYGLLLGAL YTLTSSMSWD TVFSTYSNGS LPLSIKIFGY  480
GTGFFAAVGV FFGPLVLYIG AKKPDTLPLK LNPANVMQTL LDVATANIAF AFIGNMSLRF  540
LQHDVTLLYL VAGLACASIT VSMTFVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	9e-18	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO76122