PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO75238 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 184aa MW: 20065.5 Da PI: 7.2125 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 62.7 | 7.7e-20 | 39 | 95 | 5 | 56 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegee.gt....aaalkCaACgCHRnFHRre 56 Y eC++N s+Gg+ vDGC f+ + + g+ +a+ C+ CgCHRnFHR+ OMO75238 39 LYMECRRNYISSIGGNIVDGCEKFVRNGAAVgGDrnqtREAFYCSKCGCHRNFHRKI 95 69***********************984433333445599***************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MEKSSNIDQT NAASNGALPP SRPNSSLPGT NRGGAAPPLY MECRRNYISS IGGNIVDGCE 60 KFVRNGAAVG GDRNQTREAF YCSKCGCHRN FHRKIVLPRL PANLPEETKR NCIMNFLRKQ 120 FSLTLPLPIT APWLMRSTTT PPNTDNDLVE GQGSSLSPGG EEAEEKSESD SGDEITQPLK 180 IKEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18835.1 | 3e-13 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO75238 |