PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO74913 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 98aa MW: 11733.5 Da PI: 10.5438 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.6 | 2.1e-18 | 14 | 67 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ ++++eq++ Le+ F n+++ e ++ LA++lg++ rqV +W+qN+Ra++k OMO74913 14 NKKRLNQEQVRLLEKSFDANKKLEPELKQYLANQLGVPARQVAIWYQNKRARWK 67 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 103 | 2.4e-33 | 14 | 97 | 2 | 85 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeve 85 +k+rl++eqv+lLE+sF++++kLepe K+ la++Lg+ +rqva+W+qn+RAR+kt+ lE dy++L+ ++++ ++e++rLek+v+ OMO74913 14 NKKRLNQEQVRLLEKSFDANKKLEPELKQYLANQLGVPARQVAIWYQNKRARWKTQSLELDYNTLQVKLENAVSEKRRLEKDVK 97 79*******************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
MDFQTQKLYA SKHNKKRLNQ EQVRLLEKSF DANKKLEPEL KQYLANQLGV PARQVAIWYQ 60 NKRARWKTQS LELDYNTLQV KLENAVSEKR RLEKDVKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 4e-33 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO74913 |