PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO74749 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | YABBY | ||||||||
Protein Properties | Length: 130aa MW: 15084 Da PI: 10.4148 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 115.7 | 7.6e-36 | 30 | 107 | 93 | 170 |
YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s+s+ ++kl++ + + + v+rPP+kr r+Ps yn+fikeeiqrik +nPdi+hreafs+aaknWa fP+ihfgl OMO74749 30 SSSRCKNKLPKRATINNTPERVVNRPPDKRHRAPSLYNQFIKEEIQRIKLNNPDITHREAFSTAAKNWARFPHIHFGL 107 44455556665555554445669*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MAASLHSRPG KDIQVPNYNS SSEYRIDLGS SSRCKNKLPK RATINNTPER VVNRPPDKRH 60 RAPSLYNQFI KEEIQRIKLN NPDITHREAF STAAKNWARF PHIHFGLMLE SENQPKLNDD 120 STEHFHQLLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 7e-46 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO74749 |