PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO74398 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | DBB | ||||||||
Protein Properties | Length: 212aa MW: 23174.1 Da PI: 6.3837 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.2 | 2.9e-07 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e ++lfC ++ lC++C ++ H OMO74398 4 LCDVCEGAAAILFCAADEAALCRSCDEKVH 33 7******99******************998 PP | |||||||
2 | zf-B_box | 28.5 | 3.2e-09 | 52 | 91 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H OMO74398 52 DVPRCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtH 91 5799**************************9995544455 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MRTLCDVCEG AAAILFCAAD EAALCRSCDE KVHMCNKLAS RHVRVGLADP SDVPRCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKPGR LEELGLQPLD 120 PNEVRKDQNQ QSKLAARENQ QNHRVSPVPV LDGNVDGDGK VGNKLIDLNA KPQRVHGQAS 180 TNQEQGMDVS SGNNHDSASV VPVGSFKREP EK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 1e-87 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO74398 |