PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO74157

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

G2-like

Protein Properties

Length: 384aa MW: 43080.3 Da PI: 8.9412

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO74157	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	5.7e-33	239	294	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ OMO74157 239 KQRRCWSPELHRRFVNALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 294 79****************************************************97 PP
2	Myb_DNA-binding	45.8	1.5e-14	241	292	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ OMO74157 241 RRCWSPELHRRFVNALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 292 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MGSVPPELSL DFRPTFVPKT ITNFLKEVSV IGNVSDKVSK LDAFVKRLEE EMRKIDAFKR 60 ELPLCMLLLN DAIVTLKEES MQCMARTVEP VLEEFIPLKN TKKENNHNKK NWMSSFQLWN 120 TDDDNYRSTD HKLDTKRNDE DPFQGCKNRG AARAFMPFKA NLGFAVRKEE KEEIPVHGLT 180 LLTPGIKNLK EESGSTGSRT SCSRTVSSSA PNAQPSFRSG SQPLSHQQQQ QQQQQTARKQ 240 RRCWSPELHR RFVNALQQLG GSQVATPKQI RELMQVDGLT NDEVKSHLQK YRLHTRRLPP 300 STTTPANQSV VVLGSNLWMS QDQYGDSSKG SSSQSGSPQG PLQLATNTGG TSTTGGDSME 360 DDEDTKSESY SWKSHIHKPG KDDV

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MGSVPPELSL DFRPTFVPKT ITNFLKEVSV IGNVSDKVSK LDAFVKRLEE EMRKIDAFKR  60
ELPLCMLLLN DAIVTLKEES MQCMARTVEP VLEEFIPLKN TKKENNHNKK NWMSSFQLWN  120
TDDDNYRSTD HKLDTKRNDE DPFQGCKNRG AARAFMPFKA NLGFAVRKEE KEEIPVHGLT  180
LLTPGIKNLK EESGSTGSRT SCSRTVSSSA PNAQPSFRSG SQPLSHQQQQ QQQQQTARKQ  240
RRCWSPELHR RFVNALQQLG GSQVATPKQI RELMQVDGLT NDEVKSHLQK YRLHTRRLPP  300
STTTPANQSV VVLGSNLWMS QDQYGDSSKG SSSQSGSPQG PLQLATNTGG TSTTGGDSME  360
DDEDTKSESY SWKSHIHKPG KDDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-55	G2-like family protein

Link Out ? help Back to Top
Ensembl	OMO74157