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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OMO73388 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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| Family | NAC | ||||||||
| Protein Properties | Length: 89aa MW: 10203.2 Da PI: 3.9484 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 40 | 1.2e-12 | 43 | 88 | 1 | 47 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47
lppGfrF P+d el+ +yL kkv++++l++ ++i++v++y+ +P+ L
OMO73388 43 LPPGFRFCPEDIELIEDYLMKKVNHEELPC-DIIRQVKLYEQDPSVL 88
79****************************.99***********987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 89 aa Download sequence |
MEENNYNPQQ FPSAAAANYS SSNSLIIHND ESDQEAAMNN NNLPPGFRFC PEDIELIEDY 60 LMKKVNHEEL PCDIIRQVKL YEQDPSVLT |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G39820.1 | 6e-11 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OMO73388 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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