PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO72583 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NF-YB | ||||||||
Protein Properties | Length: 244aa MW: 26377 Da PI: 7.0159 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 177.8 | 9.8e-56 | 32 | 126 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdr+lPian+srimkk lPan+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk+yl++yre ++ OMO72583 32 VREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREGDT 126 69*****************************************************************************************9665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MADAPAAPAQ AAPASPGGGS HESGEQSPRS NVREQDRYLP IANISRIMKK GLPANGKIAK 60 DAKETVQECV SEFISFITSE ASDKCQKEKR KTINGDDLLW AMATLGFEDY IDPLKIYLTR 120 YREGDTKGSA KGGDASAKKE VQPSPNAQLA HQGSFPQGVN YGNSQVISLS LSVHVNYKPK 180 SLHVFFGIDY IPKDCVNLGL IVDLSSWRGL NVLLSSSVME YGPIFDSIGI GFLLFPVSHC 240 ICLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 8e-77 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO72583 |