PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO72022 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 27084.1 Da PI: 4.6375 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.3 | 2.3e-19 | 98 | 147 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f+tae Aa a+++a+++++g OMO72022 98 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAALAMRG 147 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MDSSYFQYPY SQFSPDQSSN SNSYVSQENL SLDPFNYPYN NNNQPLQLPF NENDSEEMLL 60 LGVLNQAPAR SDEHEVSSES NSSEEESARE NNNNNISYRG VRRRPWGKFA AEIRDSTRNG 120 VRVWLGTFDT AEAAALAYDQ AALAMRGSMA ILNFPMEKVY ESLQEMNYGF QEGFSPVLTM 180 KKRHSLKSKR GMKMMKKVKK EKEIIRMENV VVLEDLGTDY LEELLSISES SSSSTLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-43 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO72022 |