PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO71499
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WOX
Protein Properties Length: 347aa    MW: 39873.3 Da    PI: 7.2336
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO71499genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.25e-2275134357
               --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               +R+++t+eql++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  OMO71499  75 SRWNPTPEQLRTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 134
               7*****************99**************************************97 PP

2Wus_type_Homeobox115.52.6e-3774136365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+
           OMO71499  74 SSRWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136
                        79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MWTMGYNDGG ADFNMPDSFN GRKLRPLMPR PIPSTNNPPC LSRINGTDLF ALNHHLTVGD  60
QNKREFNTQP VVVSSRWNPT PEQLRTLEEL YRRGTRTPSA EQIQHITAQL RRYGKIEGKN  120
VFYWFQNHKA RERQKRRRQM ESAPDEDIFE RKDSTGANRT GYEVEQTKNW AIPINCSTLA  180
EESVSIETAA KASVAECRVA DGWIQFDEGE LQHTRNNVER NATWQQQQQQ QKIQFSNTNL  240
INNSTTSAGA ATPTIRKMDP KQSSLIKTHD HLNIFIAPNV LDHLINHNQE DHHHQDHDHG  300
DSQTLQLFPL RSDNVKEKEN GMISVAAAVS DNFTTPYQFF EFLPLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.13e-63WOX family protein