PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO71499 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WOX | ||||||||
Protein Properties | Length: 347aa MW: 39873.3 Da PI: 7.2336 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.2 | 5e-22 | 75 | 134 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ OMO71499 75 SRWNPTPEQLRTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 134 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.5 | 2.6e-37 | 74 | 136 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ OMO71499 74 SSRWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136 79***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MWTMGYNDGG ADFNMPDSFN GRKLRPLMPR PIPSTNNPPC LSRINGTDLF ALNHHLTVGD 60 QNKREFNTQP VVVSSRWNPT PEQLRTLEEL YRRGTRTPSA EQIQHITAQL RRYGKIEGKN 120 VFYWFQNHKA RERQKRRRQM ESAPDEDIFE RKDSTGANRT GYEVEQTKNW AIPINCSTLA 180 EESVSIETAA KASVAECRVA DGWIQFDEGE LQHTRNNVER NATWQQQQQQ QKIQFSNTNL 240 INNSTTSAGA ATPTIRKMDP KQSSLIKTHD HLNIFIAPNV LDHLINHNQE DHHHQDHDHG 300 DSQTLQLFPL RSDNVKEKEN GMISVAAAVS DNFTTPYQFF EFLPLKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 3e-63 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO71499 |