PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO71203
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family Dof
Protein Properties Length: 317aa    MW: 34902.1 Da    PI: 8.6837
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO71203genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.91.5e-4093154263
    zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
               +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  OMO71203  93 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 154
               7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MQELKGNAKG SIPSQPKRNK GWVLNNPDPT RVAQLVMMGR SLVRCVLVWV MVVVGGGDLN  60
LGVDPAEMPN SSLENMLGCS SKGQQERKPR PQPEQALKCP RCDSTNTKFC YYNNYSLSQP  120
RYFCKSCRRY WTKGGTLRNV PVGGGCRKNK RSSSSSKIRT QDQPNSNPLI TTLPPLTYDT  180
NDLSLAFARL QKQSSGQLGF DDHELSILGN PTTTHSHCDI LGNPSLNSAA ANSPAFLDAL  240
RNGFLGTTTH NNNFQNFYYG FGNHDNNNMG EVVDNNGEMM LPNYSEEMSS GSSNATTTAV  300
TVTTMKQEFC NGRDHQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.18e-42Dof family protein