PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO69999

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 480aa MW: 52060.8 Da PI: 6.2445

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO69999	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.6	7.6e-40	125	185	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+ss OMO69999 125 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSS 185 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MLEESKDPAI KLFGKRIHLP ADGEISGISA DDFDKAKCRS DDEEEKNKTQ QESLAEITTD 60 TGQEDDDIPP SDREESTNPE ALPEPNDVNP KTPSTDEESG KSKTGKTDTE QSDATNSQEK 120 TLKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK 180 NKNSSSHYRH ITISEALQAA QIDAPNGLHH PALKSNGRVL SFGVDAPICD SMASVLNLGE 240 RKVFNGTRNG FHCLEEQKSS VPCREENGDD CTGGTSITVS SSMDEGSRSC IQETMMGNIN 300 GFPSPIPCLP GVPWPYPWNS AVPPPAFCPS AGAFPVSFYP PAAYWNCGIP GTWNIPLLSP 360 QSSSSSNQKA PTSGPNSPLG KHSREGDIVK LDDSEKEKPS KQKNGSVLVP KTLRIDDPSE 420 AAKSSIWATL GIKNESHSGG GLFKAFHSKS VEKNHIAEAS PVLRANPAAL SRSLNFHESS

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MLEESKDPAI KLFGKRIHLP ADGEISGISA DDFDKAKCRS DDEEEKNKTQ QESLAEITTD  60
TGQEDDDIPP SDREESTNPE ALPEPNDVNP KTPSTDEESG KSKTGKTDTE QSDATNSQEK  120
TLKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK  180
NKNSSSHYRH ITISEALQAA QIDAPNGLHH PALKSNGRVL SFGVDAPICD SMASVLNLGE  240
RKVFNGTRNG FHCLEEQKSS VPCREENGDD CTGGTSITVS SSMDEGSRSC IQETMMGNIN  300
GFPSPIPCLP GVPWPYPWNS AVPPPAFCPS AGAFPVSFYP PAAYWNCGIP GTWNIPLLSP  360
QSSSSSNQKA PTSGPNSPLG KHSREGDIVK LDDSEKEKPS KQKNGSVLVP KTLRIDDPSE  420
AAKSSIWATL GIKNESHSGG GLFKAFHSKS VEKNHIAEAS PVLRANPAAL SRSLNFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-124	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO69999