PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO69995

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 492aa MW: 54001.8 Da PI: 5.6984

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO69995	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.5	7.9e-40	131	191	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+ss OMO69995 131 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSS 191 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MQETKDPAIK LFGMKIHLPA DDEILSISAD DLDKEKCENR VLVEEEDDEE DEKTEQDSLA 60 ERTSETGQEE QDELTPSNRE ESTNNESSSP EPNVNPKTPS IDEETGKSKT AKTDKEQSDG 120 TNSQEKTLKK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKACQRYWT AGGTMRNVPV 180 GAGRRKNKNS SSQYRHITIS EALQAARIDA PNGSSHQYPA FVKNNGRVLS FGVDSPICDS 240 MASILKLGDR KVVNGTRNGF HCLDQEQKVM VPCRDENGDD CTSGSSITVS NSKEENGRNC 300 IQETMMGNNI NGFPSPIPCL PGVPWPYPWN SAVAPPPAFC PSGFPMPFYP APPYWNCGVP 360 GAWNVPWLAP QSPSSSSNQK ASSSSPNSPT LGKHSREGDI VRVDDSEKHK SPKQKNGSVL 420 VPKTLRIDDP SEAAKSSIWA TLGIKNESLS GGGLFKAFHP KSDEKNHIAE ASPVLRANPA 480 ALSRSLNFHE SS

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MQETKDPAIK LFGMKIHLPA DDEILSISAD DLDKEKCENR VLVEEEDDEE DEKTEQDSLA  60
ERTSETGQEE QDELTPSNRE ESTNNESSSP EPNVNPKTPS IDEETGKSKT AKTDKEQSDG  120
TNSQEKTLKK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKACQRYWT AGGTMRNVPV  180
GAGRRKNKNS SSQYRHITIS EALQAARIDA PNGSSHQYPA FVKNNGRVLS FGVDSPICDS  240
MASILKLGDR KVVNGTRNGF HCLDQEQKVM VPCRDENGDD CTSGSSITVS NSKEENGRNC  300
IQETMMGNNI NGFPSPIPCL PGVPWPYPWN SAVAPPPAFC PSGFPMPFYP APPYWNCGVP  360
GAWNVPWLAP QSPSSSSNQK ASSSSPNSPT LGKHSREGDI VRVDDSEKHK SPKQKNGSVL  420
VPKTLRIDDP SEAAKSSIWA TLGIKNESLS GGGLFKAFHP KSDEKNHIAE ASPVLRANPA  480
ALSRSLNFHE SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-120	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO69995