PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO69561 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 295aa MW: 32542.4 Da PI: 7.9907 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.2 | 2.9e-18 | 130 | 184 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k OMO69561 130 RKKLRLSKEQSLVLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 184 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 126 | 1.7e-40 | 130 | 219 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ +LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l OMO69561 130 RKKLRLSKEQSLVLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 219 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MGEKDDGLGL SLSLGCSQNQ PSLKLNLMSL ASPPMQSLQQ KNAWNELFHS SDRQLDTRSF 60 LRGIDVNRAP TVADCGEEEG GVSSPNSTIS SLSGKRNERD AVGDETEAER ESCSRGSDDE 120 DGGAGGDASR KKLRLSKEQS LVLEETFKEH STLNPKQKLA LAKQLNLRPR QVEVWFQNRR 180 ARTKLKQTEV DCEYLKRCCE NLTEENRRLQ KEVQELRALK LSPQLYMHMN PPTTLTMCPS 240 CERVAVSSSS SSAAATSSTP TSAAAPNWQR PVPVNPWAAM PISTHRPFNA PASRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 135 | SRKKLRL |
2 | 179 | 187 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60390.1 | 5e-90 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO69561 |