PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO69178 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NAC | ||||||||
Protein Properties | Length: 216aa MW: 25214 Da PI: 4.461 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82.6 | 8e-26 | 4 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrF+Pt+e+l++ yL kkv+g+ l++ +++++++iy ePw++ ++++++ y F++ +kk+++gkr +r++ g Wk + + v++++++ OMO69178 4 LPPGFRFRPTEEQLLHGYLLKKVRGEALPC-DIVTDCEIYGErdkEPWKIFD--ENSTEKFYVFTQLKKKNPNGKRIERKAGIGSWKGQRT-DFVKDSNNN 100 79****************************.89*****99643449****62..3456788**************************8866.456666999 PP NAM 99 lvglkktLvfy...kgrapkgektdWvmheyrl 128 ++g kk +vf +++ ++ +W+m ey+l OMO69178 101 HIGFKKPFVFEvknPSSSNINKQQHWLMTEYSL 133 9*********943212333346899******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVQLPPGFRF RPTEEQLLHG YLLKKVRGEA LPCDIVTDCE IYGERDKEPW KIFDENSTEK 60 FYVFTQLKKK NPNGKRIERK AGIGSWKGQR TDFVKDSNNN HIGFKKPFVF EVKNPSSSNI 120 NKQQHWLMTE YSLVNDLSGY VLCEIRNKNS NSSARVDEQV EDEDEDYEIM AEDQQVEDEE 180 YGITAEELEE MLSDPEIQPF SYQQNNYFTP VAALSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-24 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO69178 |