PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO67833

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 489aa MW: 52956 Da PI: 6.3975

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO67833	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.1e-39	94	153	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP+G+grrknk+ OMO67833 94 PDKVLPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHL 153 78999*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MNGGDPAFKL FGRKIPVPEP QIHAGDTSSE ITNQETETSH TNTSGELDKS TATENDKEEY 60 QTSMKPNEIV TNSKPKDEQA ESNSADQEKV LKKPDKVLPC PRCNSLDTKF CYFNNYNVNQ 120 PRHFCKNCQR YWTAGGTMRN VPIGAGRRKN KHLASQYRQI IVSSDGVPLT RIENPDSPNQ 180 QLVPPGESTT AFRPSMGNGT VLKFGAEAPL CESMETVLSL GDQKRCVEMG TVSCGEIREE 240 PSSGSGSSVT PCSIRGNELP GNAPQKERLG LVGPNEQNTQ QPTQCYPVQP WIFPWNPGMN 300 NVASMASGQS TSERIAAPNI STPNAVQWCP TPMVAVPGFC PPNVPLQFVP AYWGCMPLWT 360 AGGGNVSLNG SNGCPSPSSS TSNSCCSGNG SPRLGKHSRE ANFVEEEQSE KCVLVPKTLR 420 IDDPNEASRS PIWATLGIKP DQKDPSRGGK IFNAFESKAE GKDRLPDGSH ILEANPAALS 480 RSHTFQEST

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MNGGDPAFKL FGRKIPVPEP QIHAGDTSSE ITNQETETSH TNTSGELDKS TATENDKEEY  60
QTSMKPNEIV TNSKPKDEQA ESNSADQEKV LKKPDKVLPC PRCNSLDTKF CYFNNYNVNQ  120
PRHFCKNCQR YWTAGGTMRN VPIGAGRRKN KHLASQYRQI IVSSDGVPLT RIENPDSPNQ  180
QLVPPGESTT AFRPSMGNGT VLKFGAEAPL CESMETVLSL GDQKRCVEMG TVSCGEIREE  240
PSSGSGSSVT PCSIRGNELP GNAPQKERLG LVGPNEQNTQ QPTQCYPVQP WIFPWNPGMN  300
NVASMASGQS TSERIAAPNI STPNAVQWCP TPMVAVPGFC PPNVPLQFVP AYWGCMPLWT  360
AGGGNVSLNG SNGCPSPSSS TSNSCCSGNG SPRLGKHSRE ANFVEEEQSE KCVLVPKTLR  420
IDDPNEASRS PIWATLGIKP DQKDPSRGGK IFNAFESKAE GKDRLPDGSH ILEANPAALS  480
RSHTFQEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-69	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO67833