PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO67741
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family Dof
Protein Properties Length: 88aa    MW: 9855.25 Da    PI: 10.9273
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO67741genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof129.97.1e-411374263
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
              +e+alkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkks+s
  OMO67741 13 PEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKS 74
              68899*****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MADRARLAKI PQPEAALKCP RCDSTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRNV  60
PVGGGCRRNK KSKSSSSKSS ASGDHKQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.32e-43Dof family protein