PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO67398 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | TALE | ||||||||
Protein Properties | Length: 739aa MW: 81524.5 Da PI: 7.5739 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.7 | 2.3e-09 | 566 | 603 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + OMO67398 566 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 603 664459******************************87 PP | |||||||
2 | BELL | 104.2 | 9.2e-34 | 427 | 495 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl l+eeV++rY+ y++q+q+v+ssF+ vagl +a+pY+slAlka++r+FrcLk+ i++qi OMO67398 427 EYQQKKAKLLYLQEEVCRRYRLYHQQMQMVVSSFDSVAGLSAATPYISLALKAVTRNFRCLKNVISDQI 495 89*****************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 739 aa Download sequence |
MDMRKFRSPE SHVAQQSRRD KLRVQQSSNL LHHLEEDFPN TMEQQGSPLH HGINPYLVQV 60 RNVRNANLLY DPSLIPSGII HFPTNPNVSM AHQELQIPTG MSHPSSSKLN ANSSKLSGDP 120 QGYNNSQQSC DWMVSYANAS GLGVSRESNI QNPMFVAQVL SNNGGDLKPY SAYHQDVQSS 180 DLSNPGSEIS SQDSRRQLYG DLNFVSPYGT VTTASVGNQG QENIARASNS WIDYSGNQPW 240 ISRPVMEHCQ QWDATTQGLS LSLSSNPKPK ISDAAQLNEE YGQESKPFPK PSIISKTSGK 300 SSIPEPGGTS SASLHRHTGP LGPFTGYATI LKNSRFLKPA QELLDEFCHS NWTNSKLGKV 360 CDANEGISGE ASGSASVDAA NTVDMEGGGS KGNNNSVASS STFYSCNEIG VDHGGVGSSS 420 DEPCRPEYQQ KKAKLLYLQE EVCRRYRLYH QQMQMVVSSF DSVAGLSAAT PYISLALKAV 480 TRNFRCLKNV ISDQIRHVSR ALGEDLMSPT TGTSSSKGDI NMARLKCVGQ KSGGVNMGFL 540 EPQQHGWRPQ RGLPERSVAI LRAWLFEHFL HPYPTDTDKH MLATQTGLSR NQVSNWFINA 600 RVRVWKPMVE EIHMLESKGL TEGGNHQNLR RNDAKSTSEG GGSSLPNNED QPIRDSQHWN 660 HEKRSRMDFH VPTSMEGSFM GFAPYQQSRL EMGGLGAVSL TLGLRHGVES AQQQQQQYQR 720 PEDQLRRQYG GQMIHDFAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27990.1 | 9e-93 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO67398 |