PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO67310 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GATA | ||||||||
Protein Properties | Length: 324aa MW: 36061.2 Da PI: 9.1056 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.2 | 2.6e-19 | 186 | 219 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk + OMO67310 186 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 219 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MTSSNCYSSV YPFPIDLNQD HDHQNQLLIN LNPQPSNSSS SSCPLFFNPP TVPHDQPAYF 60 SSTRDQPQQD HQAKIIYVPQ NEHDEPLDES DVSTGLKFSI WKKEEQVLEQ DEELETSRNE 120 TAAKWMSSKM RIMRKMMTSS DHADNNSSNS STRPKFEDQK QPSSSSPDNS CSNSSYNNNN 180 NTIRVCADCN TTKTPLWRSG PRGPKSLCNA CGIRQRKARR AMAAAAAAAA ANGSINNVAA 240 ESTKPSSMKI SKVHHKAKRS SNNGLKNKKC KLSNSQSHQG RKKLCFEDLR VILSKNSAFH 300 RVFPQDEKEA AILLMALSYG LVHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 6e-35 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO67310 |