PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO67310
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GATA
Protein Properties Length: 324aa    MW: 36061.2 Da    PI: 9.1056
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO67310genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.6e-19186219134
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
               C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  OMO67310 186 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 219
               *******************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MTSSNCYSSV YPFPIDLNQD HDHQNQLLIN LNPQPSNSSS SSCPLFFNPP TVPHDQPAYF  60
SSTRDQPQQD HQAKIIYVPQ NEHDEPLDES DVSTGLKFSI WKKEEQVLEQ DEELETSRNE  120
TAAKWMSSKM RIMRKMMTSS DHADNNSSNS STRPKFEDQK QPSSSSPDNS CSNSSYNNNN  180
NTIRVCADCN TTKTPLWRSG PRGPKSLCNA CGIRQRKARR AMAAAAAAAA ANGSINNVAA  240
ESTKPSSMKI SKVHHKAKRS SNNGLKNKKC KLSNSQSHQG RKKLCFEDLR VILSKNSAFH  300
RVFPQDEKEA AILLMALSYG LVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.16e-35GATA family protein