PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO67291
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C3H
Protein Properties Length: 612aa    MW: 68103 Da    PI: 7.1059
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO67291genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH185.2e-063293431226
               TS--TTTTT-SS-SS CS
   zf-CCCH  12 tGtCkyGdrCkFaHg 26 
               +G C++G++C+F H+
  OMO67291 329 SGNCPRGEKCNFQHD 343
               69************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    
MAPPRILLCG DVLGRLSQLF KRVNSVNKSA GPFDALFCVG QFFPDETDRL DELMDYVEGR  60
AQIPLPTYFI GDYGVGAPKV LSVASKNSAN QGFKMDGFKI CDNLFWLKGS GKFTLHGLFV  120
AYLSGRQSSS GQQFGTYGQD DIDALRAFAE EPGIVDLFLT YPLLFFTNEW PSGVTNRANE  180
SDIPAGILDS TGSDSTVAQL VAEIKPRYHI AGTKGAFYAR EPYSNVDAMH VTRFLGLASV  240
GNKDKQKFLH ALSPTPSSAM SAAEISAKPP NTTLSPYTLA DQADHPKEST KRAGDSLPDS  300
QYWRYDVSNK RQKHGSGDGN KVCFKFISSG NCPRGEKCNF QHDVDAREQF LRGVCLDFII  360
KGKCEKGPDC NFKHSLQDEG ESYTSRRPGS GNINRSKECW FCLSSPNVDS HLVISIGENF  420
YCALAKGPLV QDHALIIPVE HLPNTLCLPE DSEIELGKYR NSLKMYYKNQ GKDAVFFEWI  480
SVRSSHANLQ AIPVPSSKTA ALKDIFNLAA KKLGFEFVTK KFNNNSEGRK WLRTQFDKNL  540
SCFYVELPDG SILLHVIEEN EKFPAQFGRE VLAGLLNMAD RADWRNCTPG KEEETMLAEN  600
FKKRFQVFDP SQ