PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO66461

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

TALE

Protein Properties

Length: 644aa MW: 70118.2 Da PI: 6.9837

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO66461	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	435	472	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + OMO66461 435 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 472 554459******************************88 PP
2	BELL	108.5	4.1e-35	329	395	6	72
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +k k++L+s+l+eV++rYkqy++q+q+v++sFe vaglg+a+pY++lAlka+S+hFrcLk+ai++q+ OMO66461 329 RKHKSRLISMLDEVYRRYKQYYQQMQAVVASFEYVAGLGNAAPYAHLALKAMSKHFRCLKNAITDQL 395 5789************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MAEGFEPYHV PQQSRRDKLR IVAQNHPSAC IEPTGATVSL SACSALLPLY DPSLLPSDLL 60 TCAATTTSTH GGSHHVDFHH QLSAAAKNSS VCVVKEEGTV GVNFMGFVSS SSSSTPHHHN 120 PYLDPQSSLP LNPSSIQDHM NHNNNNPFVY TPQSLQNLRD FDHHGYNNGG GHEVVQVYKP 180 EPLSLNHHES SSTGQGLSLS LSSHNTHQSN LPLELNLQRY NESVTASGYV VPAAIVGGGV 240 GSASTSNDQV SRNNSIPLGP FTGYASILKG SRFLRPAQQL LEELCDVGRG IYTEKLTPDS 300 SLLEPPLMDN LVAGEITDDI PLSGNDGGRK HKSRLISMLD EVYRRYKQYY QQMQAVVASF 360 EYVAGLGNAA PYAHLALKAM SKHFRCLKNA ITDQLQFTNK AHGQISPGFL EHQPVWRPQR 420 GLPERAVTVL RAWLFEHFLH PYPTDTDKLM LAKQTGLSRS QVSNWFINAR VRLWKPMVEE 480 IHMLETRQAQ KASQKEDRNG NKSTNDHLSS ANSLASENPS TSTQRGVQDT PSKRTRSELP 540 DNIPMGSEPL NLSYNSMSSH PHVDVGVGVS MGGGGSSGGV SLTLGLHQNN GIGLSEPYPI 600 NAAQRFGLGL EVSSEGYVIG GFEAQNRHFG RDVIGGQLLH DFVG

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MAEGFEPYHV PQQSRRDKLR IVAQNHPSAC IEPTGATVSL SACSALLPLY DPSLLPSDLL  60
TCAATTTSTH GGSHHVDFHH QLSAAAKNSS VCVVKEEGTV GVNFMGFVSS SSSSTPHHHN  120
PYLDPQSSLP LNPSSIQDHM NHNNNNPFVY TPQSLQNLRD FDHHGYNNGG GHEVVQVYKP  180
EPLSLNHHES SSTGQGLSLS LSSHNTHQSN LPLELNLQRY NESVTASGYV VPAAIVGGGV  240
GSASTSNDQV SRNNSIPLGP FTGYASILKG SRFLRPAQQL LEELCDVGRG IYTEKLTPDS  300
SLLEPPLMDN LVAGEITDDI PLSGNDGGRK HKSRLISMLD EVYRRYKQYY QQMQAVVASF  360
EYVAGLGNAA PYAHLALKAM SKHFRCLKNA ITDQLQFTNK AHGQISPGFL EHQPVWRPQR  420
GLPERAVTVL RAWLFEHFLH PYPTDTDKLM LAKQTGLSRS QVSNWFINAR VRLWKPMVEE  480
IHMLETRQAQ KASQKEDRNG NKSTNDHLSS ANSLASENPS TSTQRGVQDT PSKRTRSELP  540
DNIPMGSEPL NLSYNSMSSH PHVDVGVGVS MGGGGSSGGV SLTLGLHQNN GIGLSEPYPI  600
NAAQRFGLGL EVSSEGYVIG GFEAQNRHFG RDVIGGQLLH DFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-100	TALE family protein

Link Out ? help Back to Top
Ensembl	OMO66461