PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO66344
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GRAS
Protein Properties Length: 749aa    MW: 85670.6 Da    PI: 6.4746
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO66344genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3958.2e-1213767471374
      GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
               l++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++f+ +L+arla+++s++yk+l +++ts    s+ l+a+ l++ +sP+ k+sh+++N++
  OMO66344 376 LRTLLIHCAQAVAADDQRTANELLKKIRQHSSPFGDGNQRLAHCFADGLEARLAGTGSHIYKSLVSKRTS---ASDILKAYYLYVAASPFRKVSHFICNKT 473
               6789*************************************************************99999...9*************************** PP

      GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
               I  a  ++ ++HiiDf+i +G+QWp++++ ++ R++gpp lRiTg++ p++g   +e++eetg+rLa +Aee++vpf++n+ +ak++e+++leeL+++ +E
  OMO66344 474 INLASRKSMKLHIIDFGILYGFQWPTIMERFSLRSNGPPLLRITGIDFPQPGfrPAERVEETGRRLAAYAEEFKVPFQYNA-IAKKWENITLEELDIHDDE 573
               ***************************************************9*****************************.7****************** PP

      GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301
                ++Vn+ ++ ++lldesv+++s+r+ vL+l+k+++Pk++v+   +  +n++ F++rf e l ++s++fd+le+ +pre+ er+++E+e++gre+ nv+ace
  OMO66344 574 FVVVNCLYRSKNLLDESVAVDSPRNMVLNLIKKINPKLFVFGIMNGAYNAPFFVTRFREVLFHFSSMFDMLETIVPREEWERMTIEKEIFGREALNVIACE 674
               ***************************************************************************************************** PP

      GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               g er+er et+++W++r  +aGF +vp++ +++k+a + ++ ++ + + ++e+s +lv+gWk+r L+++SaW+
  OMO66344 675 GWERVERPETFKQWHARNLRAGFLQVPFEREIVKEATYRVQSFYHKDFLIDEDSRWLVQGWKGRILYALSAWK 747
               ********************************************889*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    
MGMDPRFRGH SGFQLRNQTM SVFPNQPVSV FPNQNFVTVP RFQNTYIDHN FREFHYHPND  60
PTPSNTAPVP SLSHEEDPSD DCDFSDSVLR YISHILMEED KEDKSCMLQE SLDLQAAEKS  120
FYDVLGKKYP PSPDQNPSFF YESGENPNSY IDDSLVGNYN SFVDNCWMQN LGDYGNGTSQ  180
ALTLPVPSIS RSSYCSSIAS IDGMMESPNS TLQVPDLNGE IQSIWQFRKG VEEASKFIPR  240
SEDLFSNLEV YGVESQGWTN GVVVKEEKKD DVEYRNRPSG SKGRKISHRD DVDSEDERSS  300
KQAAVFEETD MRSEMFDMVL LCSTGKEPTK FTAFRESLRN GTGKIVQQSQ NGAPKGPKAG  360
KNRGKKQNGK KEVVDLRTLL IHCAQAVAAD DQRTANELLK KIRQHSSPFG DGNQRLAHCF  420
ADGLEARLAG TGSHIYKSLV SKRTSASDIL KAYYLYVAAS PFRKVSHFIC NKTINLASRK  480
SMKLHIIDFG ILYGFQWPTI MERFSLRSNG PPLLRITGID FPQPGFRPAE RVEETGRRLA  540
AYAEEFKVPF QYNAIAKKWE NITLEELDIH DDEFVVVNCL YRSKNLLDES VAVDSPRNMV  600
LNLIKKINPK LFVFGIMNGA YNAPFFVTRF REVLFHFSSM FDMLETIVPR EEWERMTIEK  660
EIFGREALNV IACEGWERVE RPETFKQWHA RNLRAGFLQV PFEREIVKEA TYRVQSFYHK  720
DFLIDEDSRW LVQGWKGRIL YALSAWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein