PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO65299 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | FAR1 | ||||||||
Protein Properties | Length: 258aa MW: 30128 Da PI: 6.1864 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.2 | 1.8e-25 | 78 | 168 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY Y++++GF+vr++++++s+ n+ ++ ++fvCskeg+re++ ++++ + + tr gC a+l++ +++ kw+vtk+++eHnH+l+ OMO65299 78 EFYVVYGRRTGFTVRIHHNRRSRINNMVIGQDFVCSKEGFREKKYMYRKDR-VlpPPPITREGCPAMLRLALRDGVKWVVTKFVKEHNHSLM 168 6******************************************99983333.244899********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MESTSSQGID SDESVRCLQV ENFDDQELVD HELSDNIDLC MGEVDKIIDE SNESSPLFGD 60 AVEPYIGMEF KTRDAAKEFY VVYGRRTGFT VRIHHNRRSR INNMVIGQDF VCSKEGFREK 120 KYMYRKDRVL PPPPITREGC PAMLRLALRD GVKWVVTKFV KEHNHSLMSP GKVPWRGTAK 180 NLISEDEKDQ RIRELTQELN NEKQKCKRRC AAYEEQLRSI LKFVEEHSDQ MSKRVEDIVK 240 NIREFEDSQH EGSNCRYV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 4e-43 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO65299 |