PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO64574 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26912.5 Da PI: 6.2429 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.5e-20 | 46 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a++k++g OMO64574 46 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAALAYDRAALKFKG 95 7********.**********94....45************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MTAMVTALSQ VMGTDQQLLS FPQSSESTVK QEPAVQDQPE NTRRRHYRGV RQRPWGKWAA 60 EIRDPKKAAR VWLGTFDTAE DAALAYDRAA LKFKGTKAKL NFPERVQGNT EISYLTGQGD 120 SSSAAAAVGP EQNPTTTPAH AVPSPWSQDS YPDLFQYAQL LSSSNDADIS YYTSNLFKQD 180 QLPLSPQFPS MSASSTFTSQ HHLRPHQDQT RFSTMYDQSS SGYDYLNHQY GKDFDPSNPS 240 E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 1e-44 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO64574 |