PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO64258
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family Dof
Protein Properties Length: 302aa    MW: 33135.7 Da    PI: 9.0589
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO64258genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.63.1e-393999262
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
              + ++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ss
  OMO64258 39 PPEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSS 99
              57899*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDAAKWSQGF QDIGLVKPME EMVSNTCTAR PMLERKTRPP EQLNCPRCNS TNTKFCYYNN  60
YSLTQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSF SSSSSSSSSS AQAKVPDLNP  120
KSSHKGQDLN LAFPVAMQDH QSHHGLSQFI QMPKMENNNN NNIDQQQNPN YIASNSCNNN  180
NTCSTPPLSA LELLRTGMAS RGLNSFINPA PSSVPESAAL YSTGFSMQDY KPATLSFSID  240
GMGNRGIHGV QENNGGRLFF PFGEMKPISS SNEVDHQNNK GSQQGNSAGY WNNNGVLGGG  300
SW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.46e-75Dof family protein