PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO64233 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 224aa MW: 25762.6 Da PI: 4.8806 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.6 | 1.1e-18 | 19 | 73 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le++Fe+++ + +++ + A++lgL+ rqV +WFqN+Ra++k OMO64233 19 KNKRRFSDEQIKSLESMFESESRLEPRKKLQVARELGLQPRQVAIWFQNKRARWK 73 67889*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 121.2 | 5.3e-39 | 20 | 111 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+k+LE++Fe+e++Lep++K ++areLglqprqva+WFqn+RAR+k+kqlE+dy+ L+++y++l+++ e+L+ke+++L +l++ OMO64233 20 NKRRFSDEQIKSLESMFESESRLEPRKKLQVARELGLQPRQVAIWFQNKRARWKSKQLERDYSILQSNYNNLASKFESLKKEKQALVIQLQK 111 79************************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAEPFSSMNE VTTKKKKNKN KRRFSDEQIK SLESMFESES RLEPRKKLQV ARELGLQPRQ 60 VAIWFQNKRA RWKSKQLERD YSILQSNYNN LASKFESLKK EKQALVIQLQ KLNDMLKKPK 120 EEGECCGQVT ATNSIEGDSE KGEGVNKSDS MERSEHALGV LSDDDSGIKT DYFGLEEEPN 180 LITSMVDVEP ADGSLTSSED WHGFDSDGLF DHSSSDYQWW DFWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 4e-76 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO64233 |