PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO62333
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GATA
Protein Properties Length: 307aa    MW: 34215.6 Da    PI: 8.478
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO62333genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.22e-17234268135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               Cs+C +  Tp+WR gp g+ktLCnaCG++y++ +l
  OMO62333 234 CSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 268
               *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MDFCRNVSVS GEYQQEQVLS SPCSKLSTLD DLFPAQNTEV DVSMEWLSIF VEDCFSSTGN  60
CIPVTAEATK TTTTTTNGQN KNKSTDETTK QAVSAAAKSL LQKPQQNDTL ASLQKFVVPG  120
KARSKRKRTT ATLLSKTKSN PFSSWSKNLN PHNPNFQLAS SDPPLLHQTY WLADSELMVP  180
KKEEDNNSGI SNIMGSSNSE EEESKKEEEI MVEGKMMMMN KESLGQQQQQ PRRCSHCLAQ  240
RTPQWRAGPL GPKTLCNACG VRYKSGRLLP EYRPAKSPTF VSYLHSNSHK KVMEMRMSCL  300
SSIPSEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-35GATA family protein