PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO60970 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 26191.1 Da PI: 9.2098 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.8 | 4.2e-16 | 57 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa a++ a++ l+g OMO60970 57 RYLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDSAARLLRG 106 689******.7*********42...36***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MNSMDSSRTT QSQSPCKDQN SKQLDQSESF HDEDGDHQKI RSKKKIPKIS IKNNGRRYLG 60 VRQRPSGRWV AEIKDSSQKL RLWLGTFDRA EEAALAYDSA ARLLRGRNAK TNFEYNHGVI 120 NTYEQNCNLL GKNPRLFRLL QLTIMKNHAR STCHKSNGSL VPAWINNQSN VNGFDTLVEE 180 TIFCSSDDHH DEGSNNKLCQ LSLGSSKVYS SVVVAPSFST SLDHEKDSQD AK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-15 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO60970 |