PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO60905 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | DBB | ||||||||
Protein Properties | Length: 249aa MW: 27260.2 Da PI: 4.0273 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.2 | 2.6e-06 | 17 | 57 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 r C++++ +lfC++ +lC+dC +++H H+ OMO60905 17 RACDTCQAAACTLFCHTHAAYLCNDCDQQIHAAdsmalsHQ 57 57******99*********************6666667776 PP | |||||||
2 | zf-B_box | 29.4 | 1.6e-09 | 58 | 104 | 2 | 42 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvpl 42 + ++C+ +e+ ++ C+ + lC +C +e+H + Ht+vp+ OMO60905 58 RVWICTVCENAPAAVTCRADAASLCINCDVEIH-SvnplarrHTRVPI 104 5789*****************************.44888889**9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MLKVCSGGDG FPTNWARACD TCQAAACTLF CHTHAAYLCN DCDQQIHAAD SMALSHQRVW 60 ICTVCENAPA AVTCRADAAS LCINCDVEIH SVNPLARRHT RVPIPPLSGL ACSTSNTYQD 120 ELPGLMFDMA NEIAAAPEMN EGIDEDETDS WLLLEPDNTD NQTVSGFTYG EQVDEYMDVM 180 DSCTEYQCQE QCSDQQQLPS FNFPEDSGSD SVVSVRTFEP KKQSPQRGET IAAAANIPAV 240 SEYLLQHRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02380.1 | 5e-47 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO60905 |