PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO59626 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 26053.5 Da PI: 4.5816 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.9e-18 | 57 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a++ ++g OMO59626 57 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALTIKG 106 69****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDSEFEPQSS ASTSSSTPAN DSSSSSSEFN KSTRGNESKR KAKNDEVEQQ GNSKHPTYRG 60 VRMRQWGKWV SEIREPRKKS RIWLGTFPTA EMAARAHDVA ALTIKGKSAF LNFPEIAHEF 120 PRPVSSSPKD IQAAAAKAAA LSFTKSHEDE EIEAESSSQV DQMVPRSPAS TVTSQEDSPI 180 INNDDAFIDL PDLLLDMNHQ IDEFWGSLSW QLASGTDDPV GNGFGYEEPC LWEYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35700.1 | 2e-57 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO59626 |