PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO57337 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GeBP | ||||||||
Protein Properties | Length: 248aa MW: 27262.5 Da PI: 9.7595 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 43.3 | 1e-13 | 105 | 148 | 54 | 97 |
DUF573 54 lveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + +K+rrL+kK+++ +++++gk+ fsk+hd+k ++lsk+iWg OMO57337 105 VADKVRRLRKKYRNLAERSNNGKDLLFSKAHDKKLYQLSKRIWG 148 679****************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MAGKPTKNPP PKDQESSSSN GGEEEEEESK TGTQNTPQTK PVEEEGDGKS GGGDSDGESE 60 FESDAGMAAK KSQEAIGTKM ISNSKAAQTP SVAAGKRGRE SDLAVADKVR RLRKKYRNLA 120 ERSNNGKDLL FSKAHDKKLY QLSKRIWGAK DTDEDMEDPK EKDLNLSDIV NNKSKSGSGG 180 IDTGTGTAMV DFNRTEEMVL KDCMTRLTAE KRANMEKKLK VIQLESYLKR SRLIRKLVKS 240 TLHAYKSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 2e-09 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO57337 |