PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO57237 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | GATA | ||||||||
Protein Properties | Length: 221aa MW: 25249.2 Da PI: 7.7487 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.1 | 2.4e-18 | 155 | 189 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C++ kTp+WR gp g+ktLCnaCG++y++ +l OMO57237 155 CSHCRSEKTPQWRMGPLGPKTLCNACGVRYKSGRL 189 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MAVEDINGDN NNNNNNSNMN DLSLPGDDLE EFFGFESQLC VPQDSLDDID WFPNFTDEFI 60 SLDGIFLTPE HDLLSEDCSA WKNKKRPRAA VVEEQGVKNN SIVPFATKKQ RSKRSGGGYG 120 KRGCWSAKQL EEKDYNYSTK SEELDEEWNK EKRKCSHCRS EKTPQWRMGP LGPKTLCNAC 180 GVRYKSGRLV AEYRPAASPT FDSVKHSNFH KKILRRKGFK P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25830.1 | 2e-34 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO57237 |