PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO57183 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 22017.5 Da PI: 5.2397 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47.7 | 5e-15 | 31 | 76 | 2 | 48 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 ppG+rF+P+deelvv+yL+kk+ +++l+l ++ikev++y ++P++L OMO57183 31 PPGIRFRPRDEELVVFYLRKKLLDQPLPL-NMIKEVELYAHHPQELV 76 9****************************.89**************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MSLIRQNHRA NVAQNRVLTQ EQVQAVFDLY PPGIRFRPRD EELVVFYLRK KLLDQPLPLN 60 MIKEVELYAH HPQELVGSGS LGGNDQASHA LAQPFNNLKR LRLDDVSKSK LDDDSPKLKL 120 DESDDQYANG VASITPKYPN YYNEVICDQS SSSFVGNNLH DPYDDYNMNF MADPSFDGLG 180 FLNQEFHGHH YY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 2e-12 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO57183 |