PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO57107 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | bHLH | ||||||||
Protein Properties | Length: 202aa MW: 22821.7 Da PI: 6.68 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.1 | 7.7e-09 | 98 | 138 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L OMO57107 98 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 138 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSSMEDHILH DQLPLNPIIW QSSNFPFQTP PSTTTSNDQQ LGQQVVDEEE EPEEELSAMK 60 EMLYKIAAMQ PVDIDPATIR KPKRRNVRIS DDPQSVAARH RRERISEKIR ILQRLVPGGT 120 KMDTASMLDE AIRYVKFLKR QIRVLQQSHN QQPPCQWQVT PNKALVSTSS TSMETQQAGP 180 AGFSAFGATN GGNNPLCFNN HE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00120.1 | 1e-48 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO57107 |