PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO57056 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WOX | ||||||||
Protein Properties | Length: 288aa MW: 32474.8 Da PI: 6.9275 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.3 | 7.2e-20 | 26 | 87 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r p+ae++++++++l +++ ++V++WFqN++a+e++ OMO57056 26 STRWTPTTDQIRILKDLYYNngVRSPTAEQIQKISARLrqygKIEGKNVFYWFQNHKARERQ 87 58*****************8678*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.4 | 1.1e-36 | 25 | 89 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iq+i+a+L++yGkie+kNVfyWFQN+kaRerqk+ OMO57056 25 SSTRWTPTTDQIRILKDLYYnNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNHKARERQKK 89 789***************9779*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MEPQQQHVNE DSSGSGKGSF LCRQSSTRWT PTTDQIRILK DLYYNNGVRS PTAEQIQKIS 60 ARLRQYGKIE GKNVFYWFQN HKARERQKKR FTTTTTTDVP MQRPTTVSNN APSCWKPDDH 120 NSIHNNNKYP NLNPGYSPAS PNCSTGVITS GQMGNYGYGS MTMEKSFRNC SISCGSSTNA 180 SEVPLSHNFG WVGFDPSYAS SYTVFEKKKF IDGSIILEEE DEEEDQETVA PHIQTLPLFP 240 MRDMKPEPDS CYSGWYRTSD HHDGYVSARA SLELSLNSCT GNYSQGSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 3e-52 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO57056 |