PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO57005
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GATA
Protein Properties Length: 383aa    MW: 42115.9 Da    PI: 6.2388
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO57005genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.6e-19302336135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               Cs+Cg+tkTp+WR gp g ktLCnaCG+++++ +l
  OMO57005 302 CSHCGVTKTPQWRAGPMGAKTLCNACGVRFKSGRL 336
               *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MLYQTHHHPF LFQFRSSFTS ISPLPPSTSP SLLPSSLQEM ECVEGALKTS FRKEMALKSS  60
PQTFLDDIWV VNGGQNGVSC DDFSVDDLLD FTNEEGLLEQ QEKHEEEEEE EEVPIPSSSS  120
SPKRQKLCQD DHISNDTTNF DYGSLSTNEL AVPADDVANL EWLSHFVEDS FSEHSTAYPT  180
GTLTTKPKLP ADKEPEQEKP VTTTCFQTPV PAKARSKRAR TGARIWSLVP SPSLTESSSS  240
STSSTSSSSP SSPWLFYPYG GYGSTFEPSD PLSVEKPPVK KHKKKLSTDS AGGNGTQPTR  300
RCSHCGVTKT PQWRAGPMGA KTLCNACGVR FKSGRLLPEY RPACSPTFSS ELHSNHHRKV  360
LEMRRKKEGA EPGLTPPIVP SFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279286VKKHKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.29e-75GATA family protein