PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO56774 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | Dof | ||||||||
Protein Properties | Length: 248aa MW: 25495.3 Da PI: 8.4938 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.2 | 9e-39 | 24 | 84 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s OMO56774 24 EQEQLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRS 84 57899****************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MPSDSGDSNR RLTKALNSGA PPPEQEQLPC PRCDSTNTKF CYYNNYNFSQ PRHFCKSCRR 60 YWTHGGTLRD IPVGGGTRKN AKRSRTATSI ATSHATIMSA TNAATTTTTS HHHNYPLPAT 120 PVLLPLSANQ GSFGIGGESK GNGGGNLCGS FTSLLNTQGP AGFLALGGFG LGIGPGLEDV 180 GFGLGRGMWP FSGMGDGAAA TVGGGHGGAA TGMGNSWQFE SGETGFVGGG DCFSWPDLAI 240 STPGNGLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 9e-52 | Dof family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO56774 |