PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO56752

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 338aa MW: 35725.4 Da PI: 8.8376

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO56752	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	4e-39	63	122	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ OMO56752 63 ENQNLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNT 122 57899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MIQELLGGAG LIGGERKISI NGSILEGTPT TNSPSPSPSS STTSTTTTTT TNNNNSSGSA 60 NSENQNLRCP RCDSANTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK 120 NTTISAAVAK SSSVAKMKTV ASEIGRSGLG NGFDHHELQS PLLWASPQSS HLLALLRTTQ 180 NPNNPNTLSS IKEEVSLLGS QTMNMMNEPS AAVSTGALNG RTLGLDPLSQ VPSLGLCSPF 240 WKNNNQAQHH QSNGFVLGEV QNTGIQELYQ RLKSSSTNYY SDGSAVVLSN VGSSASSSST 300 SSSILESAPV AGGELGYWNP VFSSSSWSDL PTTNGAYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-32	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO56752