PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO55963 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NF-YB | ||||||||
Protein Properties | Length: 224aa MW: 24514.2 Da PI: 8.4718 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 181.2 | 8.8e-57 | 27 | 122 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plkvyl+kyre+egek OMO55963 27 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNKYRETEGEK 122 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MTGKRNQSSS SPIGSPSSGN ISDSCSKEQD RFLPIANVSR IMKKSLPANA KISKEAKETV 60 QECVSEFISF ITGEASDKCQ REKRKTINGD DLLWAMTTLG FENYVGPLKV YLNKYRETEG 120 EKNSMARQED QAPSTPAAVN EFNKVVNMNN NIAVKGITDH NNFQGYGSGF FSLGAQVTAH 180 HQVQSYGDNH GGMSFNTSRI RENGDGSRTM AAAAAAAHLH RVDW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 3e-64 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO55963 |