PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO55689
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WOX
Protein Properties Length: 216aa    MW: 24330.1 Da    PI: 6.0297
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO55689genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.63.3e-2160120257
               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               r+R+t+t+ ql++Le+ F + + +ps++++++++++l    +++e++V++WFqNrRa+ k+
  OMO55689  60 RQRWTPTPVQLQILERIFDQgTGTPSKQKIKDITSELsqhgQISETNVYNWFQNRRARSKR 120
               89*****************99**************************************97 PP

2Wus_type_Homeobox1049.7e-3459122265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ar+RWtPtp Q++iLe+++++G+ tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
           OMO55689  59 ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITSELSQHGQISETNVYNWFQNRRARSKRKQ 122
                        789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MTDEQLETLR KQIAVYASIC EQLVEMHKNL TAHQDLAGGR LGNLYCDPLM TSAGHKITAR  60
QRWTPTPVQL QILERIFDQG TGTPSKQKIK DITSELSQHG QISETNVYNW FQNRRARSKR  120
KQLVASSNNA ESEVETEVES PNEKKTNPEN LLSHHNPAPR AEDLCFQNPE ITSELHFLSV  180
LSNPPTYHGD DHLSGKMGVP GNYGIYEQAE DYNMAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114122RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.11e-105WOX family protein