PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO55689 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WOX | ||||||||
Protein Properties | Length: 216aa MW: 24330.1 Da PI: 6.0297 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.6 | 3.3e-21 | 60 | 120 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + + +ps++++++++++l +++e++V++WFqNrRa+ k+ OMO55689 60 RQRWTPTPVQLQILERIFDQgTGTPSKQKIKDITSELsqhgQISETNVYNWFQNRRARSKR 120 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 104 | 9.7e-34 | 59 | 122 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G+ tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq OMO55689 59 ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITSELSQHGQISETNVYNWFQNRRARSKRKQ 122 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MTDEQLETLR KQIAVYASIC EQLVEMHKNL TAHQDLAGGR LGNLYCDPLM TSAGHKITAR 60 QRWTPTPVQL QILERIFDQG TGTPSKQKIK DITSELSQHG QISETNVYNW FQNRRARSKR 120 KQLVASSNNA ESEVETEVES PNEKKTNPEN LLSHHNPAPR AEDLCFQNPE ITSELHFLSV 180 LSNPPTYHGD DHLSGKMGVP GNYGIYEQAE DYNMAG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 122 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 1e-105 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO55689 |