PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO52913 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | FAR1 | ||||||||
Protein Properties | Length: 202aa MW: 23452.9 Da PI: 8.5796 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.4 | 1.8e-26 | 37 | 125 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+r+g+i r++ C+keg+ + + k r++r++tr gCka++++k +k+gkw++t+++++HnH+l+ OMO52913 37 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHIKFDKSGKWVITRFVKDHNHPLV 125 9**************************************99999998****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MDTFTEGETM AVPCEGDSII EPYEGMEFES EDAAKIFYDE YARRVGFVMR VMSCRRSERD 60 GRILARRLGC NKEGYCVSIR GKFGPVRKPR PSTREGCKAM IHIKFDKSGK WVITRFVKDH 120 NHPLVVAPRE ARQTMDEKDK KIQELTAELR NKKRLCAAYQ EQLTAFMTIV EEHSSQLSKK 180 VQNVVNNLKE YESIEVELLQ HR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-113 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO52913 |